Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930287.1_cds_XP_016477357.1_69097
CDS Infomation

[gene=LOC107798841] [db_xref=GeneID:107798841] [protein=probable 2-carboxy-D-arabinitol-1-phosphatase] [protein_id=XP_016477357.1] [location=join(3681..4030,6778..6883,7043..7259,7341..7459,8500..8598,9876..9929,10014..10112,10327..10434,11005..11379)] [gbkey=CDS]
Sequence

ATGTACTCCATAGCTGCAAGCTCTTTCCTCATCCATAAACCACTTAAGAATTTCCCTTTT
CACAATCCAAACAGACCCTTATGTACAGTTATACGCTCTTCTTCAAGTGCTACTCAAGAA
ATTGAGAAAGAGGGGCGGAGTGAAATTGAGGGTTTACAGGGTTTGGAGTTTCCGCCGATA
AAGGCGGCGAAGAGGGTTGTGCTGGTGAGGCACGGGCAAAGCACGTGGAATGCAGAAGGT
CGGATCCAAGGCTGCTCCGATTTCTCTGTTCTTACTTCTAAAGGAGAGTCTCAGGCTGAA
ACTTCTCGTCAAATGCTTATTGATGACTCCTTTGATGTCTGCTTTTCAAGTCCACTGCGT
CGCTCGAAGAGGACAGCTGAGATAATATGGGGTGCTCGCGAGGAGGAGATCATTACTGAC
TCTGACATGAGGGAAATTGACCTTTACTCATTCCAAGGCCTCCTGAAGCATGAAGGAAAA
GCTAAATATGGTGAAGCTTTTCGTCAATGGCAAATAGATGCACCTAATTTCATCATAGAT
GGTCACTATCCAGTGAGAGAGTTGTGGGCTCGTGCTAAAAGATGCTGGGAGAAGATCTTG
GTCCATGAAAGCAAATCCGTCCTAGTAGTTGCTCATAACGCGGTTAATCAGGCTCTCATT
GCAACAGCCATTGGATTAGGAACTGAGTACTTCAGGATTCTACTTCAAAGCAATTGCGGG
GTTAGTGTGCTGGACTTCACTCCACAACCTGAGGGCGGAACCCCAAGTATTTGCCTTAAT
CGTTTAAATCAGACCCCAGGTTCGCCTGTAGCAGGGGGCAGTTCTGCAGGCAGAAAAGCT
AGTAAGCGGATCGTACTTGTCTGCCATGGAGTGTCAGAGAGTGACCTAGAGAGTAGTATG
CCGTATTCTGGCAATGGCCCCATGAACATGCTTGGAGTTATACAGGCGCAGAAAATAGCA
GAGCTGCTTCTTGATCTGAAAGTGAGTACTATAGTCAGTGGAACTAAAAGGACATCTGTA
GAGACAGCCGACACAATCTCCAAAGTTCAAGAAGCTGCTGACTGCCTTGGAGCTGACTGT
ATCCCACGCTATGTGGAGACGAAGCAGATACCAGATCTAGATGTTGAAACTATTCTAACA
CAATCGAAGAAGGATGCATCAGGAATGCAAAATGTTCCATCTGGTTGGTTAAATAGCTTG
GAAGACGGCGTGGCAACATCTTTATGGGACCAATCTGGGAAAGCATGGAAACATGTATTG
CATGAACTATCAGAGAGATCTGACGAAGAGAGTATAGTCATCGCTGTTGGCCATCCTGCA
CTTCATATCGCAATGATGGGACACTGTCTCAATCTGACAAAGGAATGGTTGGGATCGTTT
CACCTGGATGCAGGCAGCATTAGTGTTATTGATTTTCCCGATGGACCTTCGGGGAGAGGA
GTTGTCCGCTGCATAAATTATACAGCGCATCTAGGAAGATGGTCAATTCCTATTACTAGA
TCAACGCAAGCAGATGAAGAATATTGA

Peptide Sequence

PEP ID

XP_016477357.1
PEP Infomation

PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Nicotiana tabacum]
Sequence

MYSIAASSFLIHKPLKNFPFHNPNRPLCTVIRSSSSATQEIEKEGRSEIEGLQGLEFPPI
KAAKRVVLVRHGQSTWNAEGRIQGCSDFSVLTSKGESQAETSRQMLIDDSFDVCFSSPLR
RSKRTAEIIWGAREEEIITDSDMREIDLYSFQGLLKHEGKAKYGEAFRQWQIDAPNFIID
GHYPVRELWARAKRCWEKILVHESKSVLVVAHNAVNQALIATAIGLGTEYFRILLQSNCG
VSVLDFTPQPEGGTPSICLNRLNQTPGSPVAGGSSAGRKASKRIVLVCHGVSESDLESSM
PYSGNGPMNMLGVIQAQKIAELLLDLKVSTIVSGTKRTSVETADTISKVQEAADCLGADC
IPRYVETKQIPDLDVETILTQSKKDASGMQNVPSGWLNSLEDGVATSLWDQSGKAWKHVL
HELSERSDEESIVIAVGHPALHIAMMGHCLNLTKEWLGSFHLDAGSISVIDFPDGPSGRG
VVRCINYTAHLGRWSIPITRSTQADEEY

Transcript Sequence

Gene sequence data has not been registered.